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8X2C

Crystal structure of H5 hemagglutinin from swan-infecting H5N8 influenza virus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-06-20
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979183
Spacegroup nameP 1 21 1
Unit cell lengths81.408, 107.033, 134.756
Unit cell angles90.00, 101.05, 90.00
Refinement procedure
Resolution28.270 - 2.590
R-factor0.2317
Rwork0.231
R-free0.27010
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.606
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.19rc3_4028)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.690
High resolution limit [Å]2.5902.590
Rmerge0.143
Number of reflections700016980
<I/σ(I)>13.754
Completeness [%]99.8
Redundancy6.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2913 % dextran sulfate sodium salt, 0.1 M bicine pH 8.5, 19 % (w/v) PEG20000

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