8WXT
Structure of WDR5 in complex with WIN motif containing MBD3C R45E/V46G
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 78.442, 98.831, 80.178 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 6.870 - 1.830 |
R-factor | 0.1523 |
Rwork | 0.151 |
R-free | 0.17910 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.938 |
Data reduction software | HKL-2000 |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.830 | 1.830 |
Rmerge | 0.067 | 0.324 |
Number of reflections | 27245 | 1394 |
<I/σ(I)> | 32.53 | |
Completeness [%] | 97.7 | |
Redundancy | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 291 | 0.2 M imidazole malate, pH 5.5, 33% PEG 600 |