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8WDN

Crystal structure of PDE4D complexed with 7b-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-08-02
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)0.9738
Spacegroup nameP 21 21 21
Unit cell lengths57.965, 80.407, 163.413
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.420 - 1.550
R-factor0.2093
Rwork0.208
R-free0.23120
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.735
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER (2.8.2)
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.4201.605
High resolution limit [Å]1.5501.550
Number of reflections11170911013
<I/σ(I)>23.6
Completeness [%]100.0
Redundancy2
CC(1/2)1.0000.848
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72770.1 M HEPES, 0.2 M MgCl2, 10 % (v/v) Isopropanol, 30 % (v/v) Ethylene glycol, 18 % (w/v) PEG 3350

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