8W8T
Crystal structure of human CLEC12A CRD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2023-05-23 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.98 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 50.037, 50.037, 364.240 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.160 - 2.300 |
R-factor | 0.2371 |
Rwork | 0.235 |
R-free | 0.28540 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.420 |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.530 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmeas | 0.266 | 1.545 |
Rpim | 0.062 | 0.343 |
Number of reflections | 13302 | 1252 |
<I/σ(I)> | 11.3 | 2.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 18.1 | |
CC(1/2) | 0.997 | 0.740 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1M Sodium cacodylate (pH 6.5), 0.2M Ammonium sulfate, 30% polyethylene glycol 8,000 |