8W6U
Ferritin from Ureaplasma diversum soaking in Fe2+ solution for 5 min
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-05-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.55 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 180.521, 180.521, 180.521 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.130 - 2.099 |
R-factor | 0.1889 |
Rwork | 0.184 |
R-free | 0.23410 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.845 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASES |
Refinement software | PHENIX ((1.15.2_3472: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.140 |
High resolution limit [Å] | 2.099 | 5.700 | 2.100 |
Rmerge | 0.200 | 0.093 | 1.102 |
Rmeas | 0.238 | 0.094 | 1.112 |
Rpim | 0.029 | 0.012 | 0.143 |
Number of reflections | 27791 | 897 | 717 |
<I/σ(I)> | 3.1 | ||
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 69.9 | 61.2 | 59.7 |
CC(1/2) | 0.993 | 0.999 | 0.907 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 297 | Bicine, MgCl2 |