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8VNE

Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mn2+ for 10s

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2023-03-28
DetectorMAR scanner 300 mm plate
Wavelength(s)0.9765
Spacegroup nameP 31 2 1
Unit cell lengths114.060, 114.060, 88.020
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.370 - 1.570
R-factor0.1811
Rwork0.180
R-free0.19640
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.175
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]34.37034.3701.660
High resolution limit [Å]1.5704.6801.570
Rmerge0.0740.0370.770
Rmeas0.0810.0400.851
Number of reflections179974676628878
<I/σ(I)>12.87
Completeness [%]99.9
Redundancy11.1
CC(1/2)0.9990.9990.750
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62980.2 M Sodium Malonate, PEG 3350, 0.1 M MES

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