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8VIP

Crystal structure of the N-terminal domain of fatty acid kinase A (FakA) from Staphylococcus aureus (Mn and AMP-PNP)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2019-03-30
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.7712
Spacegroup nameP 21 21 21
Unit cell lengths42.812, 57.025, 81.696
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.760 - 1.770
R-factor0.1499
Rwork0.148
R-free0.18610
Structure solution methodSAD
RMSD bond length0.009
RMSD bond angle1.092
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareCRANK2
Refinement softwarePHENIX ((1.15_3460: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.7601.810
High resolution limit [Å]1.7701.770
Rmerge0.0650.335
Rmeas0.0680.404
Rpim0.0200.220
Total number of observations2095
Number of reflections36210798
<I/σ(I)>24.22.5
Completeness [%]97.2
Redundancy10.62.6
CC(1/2)0.9990.884
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5291Proplex D9: 15% (w/v) PEG 6000, 100 mM MES pH 6.5, 5% (v/v) 2-methyl-2,4-pentanediol, Cryo: 85% crystallization solution and 15% (v/v) MPD, 2.5 mM MnCl2 and 2.5 mM AMP-PNP added to the protein prior to crystallization.

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