Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8VHN

Crystal Structure of E. coli class Ia ribonucleotide reductase alpha subunit bound to two ATP molecules

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2011-02-25
DetectorADSC QUANTUM 315
Wavelength(s)0.97936
Spacegroup nameP 43 21 2
Unit cell lengths118.991, 118.991, 290.879
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.852 - 2.620
R-factor0.1681
Rwork0.166
R-free0.20860
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7RO8
RMSD bond length0.007
RMSD bond angle0.853
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.670
High resolution limit [Å]2.6207.1102.620
Rmerge0.1070.0480.772
Rmeas0.1150.0520.831
Rpim0.0410.0180.300
Total number of observations458752
Number of reflections6341333743146
<I/σ(I)>8.1
Completeness [%]99.495.999.5
Redundancy7.26.77.1
CC(1/2)0.9980.756
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.158.0% (w/vol)PEG3350, 80 mM HEPES pH 7.3, 280 mM magnesium chloride, 4% (vol/vol) glycerol, 1.0% CYMAL-1 detergent

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon