8VEH
Crystal structure of outer membrane lipoprotein carrier protein (LolA) from Rickettsia bellii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 19-ID |
Synchrotron site | NSLS-II |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-11-19 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.9786 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 77.802, 71.403, 78.502 |
Unit cell angles | 90.00, 115.83, 90.00 |
Refinement procedure
Resolution | 48.550 - 2.600 |
R-factor | 0.2291 |
Rwork | 0.227 |
R-free | 0.27430 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.820 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.21rc1_5177: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.550 | 2.720 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.141 | 1.245 |
Rmeas | 0.153 | 1.344 |
Rpim | 0.058 | 0.501 |
Total number of observations | 164327 | 20836 |
Number of reflections | 24006 | 2916 |
<I/σ(I)> | 10.8 | 1.9 |
Completeness [%] | 99.9 | |
Redundancy | 6.8 | 7.1 |
CC(1/2) | 0.997 | 0.600 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | Morpheus Fusion F5: 20% v/v PEG 500 MME; 10 % w/v PEG 20000, 0.04M Imidazole; 0.06M MES monohydrate (acid) pH 6.5, 0.02M DL-Glutamic acid monohydrate; 0.02M DL-Alanine; 0.02M Glycine; 0.02M DL-Lysine monohydrochloride; 0.02M DL-Serine, 0.5% w/v 1,2,4-butanetriol, 0.5% w/v 1,2,6-hexanetriol, 0.5% w/v 1,5 -pentanediol, 0.5% w/v 1,1,1-tris(hydroxymethyl)propane, 0.5% w/v meso-erythritol, RibeA.17554.a.VH3.PW39215 at 28.3 mg/mL. Plate 13404 well F5 drop 2. Puck: PSL-0710, Cryo: direct |