8VDW
X-Ray Crystal Structure of the biotin synthase from V. parvula
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS-II BEAMLINE 17-ID-1 |
| Synchrotron site | NSLS-II |
| Beamline | 17-ID-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-12-11 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.9793 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 47.465, 70.218, 195.850 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.600 - 1.807 |
| R-factor | 0.18022 |
| Rwork | 0.179 |
| R-free | 0.22689 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.009 |
| RMSD bond angle | 2.432 |
| Data reduction software | XDS |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0415) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 29.600 | 1.850 |
| High resolution limit [Å] | 1.807 | 1.810 |
| Rmerge | 0.094 | 0.757 |
| Rmeas | 0.102 | 0.827 |
| Rpim | 0.039 | 0.328 |
| Total number of observations | 26113 | |
| Number of reflections | 60902 | 4262 |
| <I/σ(I)> | 12.6 | 2 |
| Completeness [%] | 99.7 | |
| Redundancy | 6.7 | 6.1 |
| CC(1/2) | 0.999 | 0.855 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 298 | 0.1M Bis-Tris pH 5.5, 0.2M NH4OAc, 25% PEG 3350 |






