Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8VCP

Crystal structure of dimeric rMcL-1 in complex with raffinose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]101
Detector technologyPIXEL
Collection date2016-11-17
DetectorDECTRIS PILATUS 200K
Wavelength(s)1.54
Spacegroup nameP 1 21 1
Unit cell lengths56.879, 40.948, 65.839
Unit cell angles90.00, 106.50, 90.00
Refinement procedure
Resolution36.460 - 1.580
R-factor0.1555
Rwork0.154
R-free0.18490
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.422
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.21rc1_5156)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.4601.620
High resolution limit [Å]1.5801.580
Rmerge0.094
Rmeas0.098
Rpim0.029
Number of reflections398332462
<I/σ(I)>53.74.7
Completeness [%]99.398.8
Redundancy8.43.8
CC(1/2)0.9000.868
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7291.150.1 M HEPES, 50 mM sodium acetate, 23% PEG 4000

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon