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8VAJ

Human Argonaute3 bound to cityRNA and target RNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-17
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.97934
Spacegroup nameP 2 21 21
Unit cell lengths65.142, 138.126, 143.533
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.230 - 3.450
R-factor0.2109
Rwork0.206
R-free0.25430
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.688
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.21_5207)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.2303.573
High resolution limit [Å]3.4503.450
Rmeas0.2391.527
Number of reflections177311724
<I/σ(I)>7.1
Completeness [%]99.5
Redundancy6.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.8293.150.14 M sodium citrate, 0.1 M Bis-Tris propane pH 8.8, and 18% (w/v) PEG 3350 supplemented with 4% (v/v) 1,3-Propanediol

246031

PDB entries from 2025-12-10

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