8VA7
Crystal structure of CapGH3a enzyme retrieved from capybara gut metagenome
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL9-2 |
| Synchrotron site | SSRL |
| Beamline | BL9-2 |
| Temperature [K] | 293 |
| Detector technology | PIXEL |
| Collection date | 2020-03-10 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.979340 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 135.609, 132.867, 99.217 |
| Unit cell angles | 90.00, 116.27, 90.00 |
Refinement procedure
| Resolution | 47.220 - 2.600 |
| R-factor | 0.2245 |
| Rwork | 0.222 |
| R-free | 0.26610 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.420 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 47.220 | 7.710 | 2.760 |
| High resolution limit [Å] | 2.600 | 5.490 | 2.600 |
| Rmerge | 0.178 | 0.081 | 1.780 |
| Rmeas | 0.193 | ||
| Number of reflections | 46772 | 3305 | 7693 |
| <I/σ(I)> | 9.55 | ||
| Completeness [%] | 96.2 | ||
| Redundancy | 6.8 | ||
| CC(1/2) | 0.999 | 0.997 | 0.727 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M imidazole pH 8.0, PEG8000 (11% v/v) |






