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8V4P

Crystal structure of Acetyl-CoA synthetase 2 in complex with Adenosine-5'-allylphosphate from Candida albicans

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 19-ID
Synchrotron siteNSLS-II
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2023-10-08
DetectorDECTRIS EIGER2 XE 9M
Wavelength(s)0.9795
Spacegroup nameP 61 2 2
Unit cell lengths138.543, 138.543, 543.538
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.510 - 2.300
R-factor0.2127
Rwork0.211
R-free0.23800
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.516
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21rc1_5162)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.5102.340
High resolution limit [Å]2.3002.300
Rmerge0.1222.881
Rmeas0.1252.950
Rpim0.0280.632
Total number of observations2787850142098
Number of reflections1377216684
<I/σ(I)>181.6
Completeness [%]100.0
Redundancy20.221.3
CC(1/2)0.9990.812
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5291Berkeley B12: 25% (w/v) PEG 3350, 100 mM Hepes free acid/ Sodium hydroxide pH 7.5, 200 mM Ammonium sulfate. CaalA.00629.a.FS11.PD00399 at 20 mg/mL. 2mM Adenosine-5'-allylphosphate added to the protein prior to crystallization. Plate: 13583 well B12 drop 2. Puck: PSL-1611, Cryo: 10% PEG 200 + 90% well.

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PDB entries from 2024-05-15

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