8UZM
Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (NADPH bound)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 19-ID |
Synchrotron site | NSLS-II |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-10-09 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 84.096, 100.798, 123.675 |
Unit cell angles | 90.00, 95.79, 90.00 |
Refinement procedure
Resolution | 83.670 - 2.200 |
R-factor | 0.1741 |
Rwork | 0.172 |
R-free | 0.21750 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.904 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 123.040 | 2.260 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.140 | 1.187 |
Rmeas | 0.163 | 1.379 |
Rpim | 0.084 | 0.695 |
Total number of observations | 391626 | 30218 |
Number of reflections | 104034 | 7684 |
<I/σ(I)> | 8.3 | 1.5 |
Completeness [%] | 99.8 | |
Redundancy | 3.8 | 3.9 |
CC(1/2) | 0.994 | 0.500 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | JCSG+ G8: 20% PEG 3350, 0.15 M DL-malic acid, KlaeA.00020.b.B1.PW39167 at 17 mg/mL. Plate: 13677, well G8 drop 1. Overnight soak with 5mM NADPH in crystallant. Puck: PSL-0503, Cryo: 30% PEG3350 + 70% crystallant |