8UOR
Structure of atypical asparaginase from Rhodospirillum rubrum (mutant K19E)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-01-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 72.581, 77.435, 57.758 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.060 - 1.450 |
R-factor | 0.12329 |
Rwork | 0.122 |
R-free | 0.16579 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.017 |
RMSD bond angle | 2.057 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 40.000 | 1.480 |
High resolution limit [Å] | 1.450 | 3.930 | 1.450 |
Rmerge | 0.044 | 0.013 | 1.009 |
Rmeas | 0.048 | 0.014 | 1.104 |
Rpim | 0.019 | 0.006 | 0.444 |
Total number of observations | 338771 | ||
Number of reflections | 56037 | 2956 | 2717 |
<I/σ(I)> | 11.4 | ||
Completeness [%] | 96.0 | 93.7 | 95.1 |
Redundancy | 6 | 5.8 | 5.9 |
CC(1/2) | 0.999 | 0.999 | 0.757 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 uL 17 mg/mL protein in 50 mM HEPES, pH 7.0, 150 mM sodium chloride + 0.2 uL reservoir (Molecular Dimensions Morpheus A2) |