8UM6
Structure of copper bound to YcnI W137F
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-19 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.3776 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 90.263, 90.263, 207.508 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.090 - 1.950 |
R-factor | 0.21 |
Rwork | 0.203 |
R-free | 0.23880 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.788 |
Data reduction software | DIALS (3.14.2) |
Data scaling software | DIALS (3.14.2) |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 103.750 | 1.980 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.316 | 1.112 |
Rmeas | 0.320 | 1.127 |
Rpim | 0.052 | 0.185 |
Number of reflections | 37400 | 1811 |
<I/σ(I)> | 5.6 | 0.4 |
Completeness [%] | 100.0 | 100 |
Redundancy | 38.1 | 36.9 |
CC(1/2) | 0.994 | 0.774 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 3.5 | 293 | 0.1 M citric acid pH 3.5, 3.0 M NaCl |