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8U8L

X-ray crystal structure of TEBP-2 MCD3 with ds DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2021-10-19
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)1.12723
Spacegroup nameP 21 21 21
Unit cell lengths37.050, 116.480, 118.969
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution52.980 - 2.200
R-factor0.2022
Rwork0.201
R-free0.21860
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.653
Data reduction softwareMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]83.2302.270
High resolution limit [Å]2.2002.200
Rmerge0.1070.918
Number of reflections502132738
<I/σ(I)>14.73
Completeness [%]99.699.4
Redundancy10.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5289TEBP-2 MCD3 DNA + 100 mM MES, pH 6.5, 21% PEG8000, 50 mM sodium chloride, 100 mM cesium chloride, sitting drop, 16 degrees C, cryoprotectant: 20% glycerol

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