8U8L
X-ray crystal structure of TEBP-2 MCD3 with ds DNA
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-D |
| Synchrotron site | APS |
| Beamline | 21-ID-D |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-10-19 |
| Detector | DECTRIS EIGER2 X 9M |
| Wavelength(s) | 1.12723 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 37.050, 116.480, 118.969 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 52.980 - 2.200 |
| R-factor | 0.2022 |
| Rwork | 0.201 |
| R-free | 0.21860 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.653 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 83.230 | 2.270 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.107 | 0.918 |
| Number of reflections | 50213 | 2738 |
| <I/σ(I)> | 14.7 | 3 |
| Completeness [%] | 99.6 | 99.4 |
| Redundancy | 10.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | TEBP-2 MCD3 DNA + 100 mM MES, pH 6.5, 21% PEG8000, 50 mM sodium chloride, 100 mM cesium chloride, sitting drop, 16 degrees C, cryoprotectant: 20% glycerol |






