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8U6P

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 3-(2-((2-cyanoindolizin-8-yl)oxy)phenoxy)-N,N-dimethylpropanamide (JLJ754), a non-nucleoside inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-06-28
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9201
Spacegroup nameC 1 2 1
Unit cell lengths222.208, 67.384, 103.193
Unit cell angles90.00, 107.67, 90.00
Refinement procedure
Resolution41.630 - 2.810
R-factor0.2126
Rwork0.210
R-free0.25980
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.056
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]108.3982.596
High resolution limit [Å]2.5502.550
Rmerge0.8002.380
Rmeas0.0952.794
Rpim0.0351.038
Number of reflections514202564
<I/σ(I)>11.2
Completeness [%]99.9100
Redundancy6.87.1
CC(1/2)0.9980.347
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP27750 mM MES pH 5.5, 17.5% PEG 8000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine

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PDB entries from 2024-05-15

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