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8U6M

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with N-(2-(2-((6-chloro-2-cyanoindolizin-8-yl)oxy)phenoxy)ethyl)-N-methylacrylamide (JLJ751), a non-nucleoside inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-12-16
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9201
Spacegroup nameC 1 2 1
Unit cell lengths226.143, 69.736, 105.246
Unit cell angles90.00, 106.20, 90.00
Refinement procedure
Resolution37.560 - 2.620
R-factor0.2253
Rwork0.223
R-free0.26640
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.010
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]108.5822.663
High resolution limit [Å]2.6182.618
Rmerge0.0932.399
Rmeas0.1112.815
Rpim0.0591.465
Number of reflections477572366
<I/σ(I)>10.1
Completeness [%]99.9100
Redundancy6.8
CC(1/2)0.9980.373
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION727750 mM HEPES pH 7.0, 22.5% PEG 8000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine

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PDB entries from 2024-05-15

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