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8U6I

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with N-(2-(2-((2-cyanoindolizin-8-yl)oxy)phenoxy)ethyl)-N-methylacrylamide (JLJ745), a non-nucleoside inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-11-09
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9201
Spacegroup nameC 1 2 1
Unit cell lengths221.730, 67.932, 103.333
Unit cell angles90.00, 107.81, 90.00
Refinement procedure
Resolution32.700 - 2.460
R-factor0.2227
Rwork0.221
R-free0.27760
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.993
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1-4487))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]98.3832.502
High resolution limit [Å]2.4592.459
Rmerge0.1172.259
Rmeas0.1382.652
Rpim0.0731.382
Number of reflections535572652
<I/σ(I)>9.51
Completeness [%]99.9100
Redundancy6.9
CC(1/2)0.9970.375
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.327750 mM Imidazole pH 6.3, 17.5% PEG 8000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine

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PDB entries from 2024-05-15

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