Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8U5Z

Structure of Mango II variant aptamer bound to T01-7M-B

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-12-20
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.000
Spacegroup nameC 2 2 21
Unit cell lengths36.980, 181.080, 107.446
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.270 - 2.500
R-factor0.1844
Rwork0.180
R-free0.22200
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.576
Data reduction softwareDIALS (3.8)
Data scaling softwareDIALS (3.8)
Phasing softwarePHENIX (1.19.2_4158)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.2702.590
High resolution limit [Å]2.5002.500
Number of reflections127541213
<I/σ(I)>15.51
Completeness [%]98.0
Redundancy12.5
CC(1/2)0.9980.903
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP294Magnesium chloride hexahydrate, MOPS, TacsimateTM, hexamine cobalt (III) chloride

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon