8U5Z
Structure of Mango II variant aptamer bound to T01-7M-B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-20 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 36.980, 181.080, 107.446 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.270 - 2.500 |
R-factor | 0.1844 |
Rwork | 0.180 |
R-free | 0.22200 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.576 |
Data reduction software | DIALS (3.8) |
Data scaling software | DIALS (3.8) |
Phasing software | PHENIX (1.19.2_4158) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.270 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Number of reflections | 12754 | 1213 |
<I/σ(I)> | 15.51 | |
Completeness [%] | 98.0 | |
Redundancy | 12.5 | |
CC(1/2) | 0.998 | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | Magnesium chloride hexahydrate, MOPS, TacsimateTM, hexamine cobalt (III) chloride |