8U5K
Structure of Mango II aptamer bound to T01-6A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-25 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.9762 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 37.191, 181.726, 108.760 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 69.730 - 2.800 |
R-factor | 0.2247 |
Rwork | 0.222 |
R-free | 0.23540 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.715 |
Data reduction software | DIALS (2.2.10) |
Data scaling software | DIALS (2.2.10) |
Phasing software | PHASER (1.19.2_4158) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.730 | 2.901 |
High resolution limit [Å] | 2.800 | 2.800 |
Number of reflections | 9509 | 911 |
<I/σ(I)> | 5.51 | |
Completeness [%] | 96.8 | |
Redundancy | 6.1 | |
CC(1/2) | 0.999 | 0.491 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | HEPES sodium, polyethylene glycol 400, and ammonium acetate. |