8U0I
Crystal structure of PA0012 complexed with cyclic-di-GMP from Pseudomonas aeruginosa
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.2.1 |
| Synchrotron site | ALS |
| Beamline | 8.2.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-03-02 |
| Detector | DECTRIS EIGER2 S 9M |
| Wavelength(s) | 1.0004 |
| Spacegroup name | P 43 21 2 |
| Unit cell lengths | 50.317, 50.317, 90.596 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 43.988 - 1.541 |
| Rwork | 0.173 |
| R-free | 0.21010 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.012 |
| RMSD bond angle | 2.048 |
| Data reduction software | DIALS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 43.990 | 1.570 |
| High resolution limit [Å] | 1.540 | 1.540 |
| Rmerge | 0.081 | 1.064 |
| Rmeas | 0.083 | 1.080 |
| Rpim | 0.013 | 0.187 |
| Number of reflections | 17945 | 865 |
| <I/σ(I)> | 19 | |
| Completeness [%] | 100.0 | 99.9 |
| Redundancy | 39.2 | 32.9 |
| CC(1/2) | 1.000 | 0.971 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293.15 | 5.3 mg/mL PA0012 and 2.5 mM cyclic-di-GMP. 0.2 M NH4SO4, 15% (w/v) PEG4000, 0.1 M Tri-NaCit pH=5.6 |






