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8TWN

Crystal structure of nitrile synthase AetD with substrate bound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-20
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9792
Spacegroup nameP 65 2 2
Unit cell lengths101.554, 101.554, 129.094
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.250 - 2.080
R-factor0.1842
Rwork0.183
R-free0.21320
Structure solution methodSAD
RMSD bond length0.006
RMSD bond angle0.883
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.210
High resolution limit [Å]2.0802.080
Number of reflections224443470
<I/σ(I)>9.6
Completeness [%]92.4
Redundancy9.1
CC(1/2)0.9950.844
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6295100 mM MES monohydrate pH 6.0, 20% PEG 4000, 110 mM malonic acid, 15 mM ammonium citrate tribasic, 7.2 mM succinic acid, 18 mM DL-malic acid, 24 mM sodium acetate trihydrate, 30 mM sodium formate, 9.6 mM ammonium tartrate dibasic

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