8TSV
Crystal structure of the Zika virus stem-loop A (SLA) top stem
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-12-05 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 |
Unit cell lengths | 29.226, 52.532, 53.670 |
Unit cell angles | 63.60, 88.08, 85.94 |
Refinement procedure
Resolution | 29.150 - 1.510 |
R-factor | 0.1563 |
Rwork | 0.155 |
R-free | 0.17500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.351 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.150 | 1.540 |
High resolution limit [Å] | 1.510 | 1.510 |
Rmerge | 0.034 | 0.144 |
Rmeas | 0.040 | 0.174 |
Rpim | 0.020 | 0.096 |
Number of reflections | 43189 | 2043 |
<I/σ(I)> | 39 | |
Completeness [%] | 96.4 | 90.2 |
Redundancy | 3.9 | 3.2 |
CC(1/2) | 0.995 | 0.971 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | Sodium Acetate, Magnesium Sulfate, Lithium Sulfate, Isopropanol |