8TP8
Structure of the C. crescentus WYL-activator, DriD, bound to ssDNA and cognate DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-01-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 69.260, 178.941, 92.150 |
Unit cell angles | 90.00, 95.24, 90.00 |
Refinement procedure
Resolution | 68.970 - 2.740 |
R-factor | 0.1975 |
Rwork | 0.196 |
R-free | 0.24090 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.159 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 69.000 | 2.890 |
High resolution limit [Å] | 2.740 | 2.740 |
Rmerge | 0.092 | 0.657 |
Rpim | 0.060 | |
Number of reflections | 56088 | 3276 |
<I/σ(I)> | 7.6 | 1.5 |
Completeness [%] | 96.1 | |
Redundancy | 3.3 | |
CC(1/2) | 0.990 | 0.635 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Tris, 1.0 M Citrate |