Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8TMW

HTLV-1 capsid protein N-terminal domain triclinic crystal form with sulphate ion

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron siteAustralian Synchrotron
BeamlineMX1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-04-01
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9537
Spacegroup nameP 1
Unit cell lengths28.659, 30.604, 36.388
Unit cell angles65.62, 70.73, 72.03
Refinement procedure
Resolution32.220 - 1.710
R-factor0.2042
Rwork0.200
R-free0.24720
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)8ere
RMSD bond length0.003
RMSD bond angle0.547
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.2201.740
High resolution limit [Å]1.7101.710
Rmerge0.0501.571
Rmeas0.0591.861
Rpim0.0310.986
Total number of observations371311521
Number of reflections10396475
<I/σ(I)>10.20.5
Completeness [%]91.6
Redundancy3.63.2
CC(1/2)0.9990.378
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529310% ethylene glycol, 10% PEG 8K, 0.1 M HEPES, pH7.5

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon