8TJG
Structure of Nei2 from Mycobacterium smegmatis in complex with Zn2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-03 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.065, 57.177, 66.287 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.300 - 1.450 |
R-factor | 0.1629 |
Rwork | 0.161 |
R-free | 0.19990 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.042 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 66.290 | 1.480 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.068 | 0.680 |
Rpim | 0.020 | 0.305 |
Number of reflections | 69151 | 1522 |
<I/σ(I)> | 19.6 | 2.2 |
Completeness [%] | 98.5 | |
Redundancy | 11.5 | |
CC(1/2) | 0.999 | 0.782 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 295 | 0.2M ammonium acetate, 0.1M Bis-Tris, pH 5.5, 15% PEG-3350, cryoprotected in 100% paraffin oil |