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8TIY

Isoreticular, interpenetrating co-crystal of Replication Initiator Protein REPE54 and symmetrical expanded duplex (31mer) containing the cognate REPE54 sequence and an additional G-C rich sequence with 1 sticky bases and 3' terminal phosphates and crosslinked with EDC.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2021-11-12
DetectorRDI CMOS_8M
Wavelength(s)1.0
Spacegroup nameI 2 2 2
Unit cell lengths73.644, 128.328, 137.221
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.820 - 3.110
R-factor0.208
Rwork0.205
R-free0.23120
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle1.350
Data reduction softwareXDS (Jan 31, 2020)
Data scaling softwareXSCALE (Jan 31, 2020)
Phasing softwarePHASER (2.8.2)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.8203.221
High resolution limit [Å]3.1103.110
Rmerge0.0730.914
Rmeas0.0790.983
Rpim0.0300.360
Number of reflections118931168
<I/σ(I)>17.82.4
Completeness [%]96.596.76
Redundancy7.27.4
CC(1/2)0.9990.938
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8298350 mM MgCl2, 25% PEG 400, and 100 mM Tris HCl

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PDB entries from 2024-05-15

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