8TFG
1.88A CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS TOPOISOMERASE I
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-05-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.371, 92.876, 139.931 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.490 - 1.880 |
R-factor | 0.1796 |
Rwork | 0.178 |
R-free | 0.21750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5d5h |
RMSD bond length | 0.015 |
RMSD bond angle | 1.257 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.910 |
High resolution limit [Å] | 1.880 | 1.880 |
Rmerge | 0.067 | 1.137 |
Rmeas | 0.075 | 1.296 |
Rpim | 0.033 | 0.612 |
Number of reflections | 68509 | 3289 |
<I/σ(I)> | 24.9 | 1.2 |
Completeness [%] | 99.5 | 96.6 |
Redundancy | 4.8 | 4.2 |
CC(1/2) | 0.996 | 0.501 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 289 | 0.2M Sodium Malonate, 20% (w/v) PEG3350 |