Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8TBW

Human Class I MHC HLA-A2 in complex with sorting nexin 24 (127-135) peptide KLSHQPVLL

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2019-07-30
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameC 2 2 21
Unit cell lengths66.052, 157.570, 185.912
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.710 - 2.081
R-factor0.1754
Rwork0.172
R-free0.20530
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.834
Data reduction softwareDIALS
Data scaling softwareDIALS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.7102.156
High resolution limit [Å]2.0812.081
Number of reflections585024715
<I/σ(I)>13.57
Completeness [%]95.6
Redundancy13.7
CC(1/2)0.9950.904
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277.15Purified protein complexes were concentrated to 7.4 mg/mL before crystallization. The crystals were grown in 12.5% PEG 4000 and 0.1 M MES (pH 6.5) via hanging drop vapor diffusion. Crystals were harvested and cryoprotected in 8% glycerol/92% mother liquor and immediately stored in liquid nitrogen

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon