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8TAQ

Sequence specific (AATT) orientation of Hoechst molecules at a unique minor groove binding site (position2) within a self-assembled 3D DNA lattice (4x6)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyPIXEL
Collection date2019-10-19
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.92
Spacegroup nameP 32
Unit cell lengths68.886, 68.886, 56.745
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.443 - 2.951
R-factor0.2456
Rwork0.245
R-free0.25940
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.856
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10_2152: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.000
High resolution limit [Å]2.9508.0002.950
Rmerge0.0770.0540.739
Rmeas0.0810.0560.779
Rpim0.0240.0170.239
Number of reflections5913312236
<I/σ(I)>11.4
Completeness [%]93.198.169.8
Redundancy10.711.79.4
CC(1/2)1.0000.9990.918
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2980.5 mL of 0.05 M Na Cacodylate pH 6.0 with 200 mM MgCl2 and 2.5 M KCl was added to the reservoir with 2 uL added to the drop containing 4 uL of DNA stock.

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