8T1S
Structure of the alpha-N-methyltransferase (SonM) and RiPP precursor (SonA with QSY deletion) heteromeric complex (bound to SAH)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-03 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.390, 108.730, 59.140 |
Unit cell angles | 90.00, 93.66, 90.00 |
Refinement procedure
Resolution | 52.280 - 2.000 |
R-factor | 0.2045 |
Rwork | 0.203 |
R-free | 0.23814 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.553 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.280 | 2.100 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmeas | 0.111 | 0.582 |
Number of reflections | 44465 | 6044 |
<I/σ(I)> | 10.89 | |
Completeness [%] | 99.7 | |
Redundancy | 5.41 | |
CC(1/2) | 0.997 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 240 mM sodium malonate pH 5-5.5, 8-12% PEG 3350 at a 1-1 or 2-1 ratio of protein to mother liquor. Protein concentration is 20mg/mL. |