8SVZ
Structure of the Francisella response regulator KdpE receiver domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-07 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 134.708, 134.708, 123.118 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.440 - 3.350 |
R-factor | 0.2301 |
Rwork | 0.228 |
R-free | 0.24870 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.615 |
Data reduction software | HKL-2000 (720) |
Data scaling software | HKL-2000 (720) |
Phasing software | PHASER (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.400 |
High resolution limit [Å] | 3.340 | 3.340 |
Rmeas | 0.193 | 7.345 |
Rpim | 0.057 | 2.345 |
Number of reflections | 10007 | 487 |
<I/σ(I)> | 24.825 | 0.326 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.1 | 9.2 |
CC(1/2) | 0.961 | 0.120 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 1.5 M ammonium sulfate, 0.1 M Tris pH 8.5, 12% glycerol |