8SUK
Structure of Rhodococcus sp. USK13 DarR-c-di-AMP complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-01-12 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 244.542, 38.981, 115.641 |
Unit cell angles | 90.00, 91.41, 90.00 |
Refinement procedure
Resolution | 41.490 - 2.450 |
R-factor | 0.2169 |
Rwork | 0.215 |
R-free | 0.26010 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.939 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.490 | 2.520 |
High resolution limit [Å] | 2.450 | 2.450 |
Rpim | 0.070 | 0.378 |
Number of reflections | 40140 | 2175 |
<I/σ(I)> | 5.8 | 1.1 |
Completeness [%] | 98.0 | |
Redundancy | 3.2 | |
CC(1/2) | 0.989 | 0.654 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 274 | 0.1 M Tris pH 8.5, 1.34 M lithium sulphate and 1.3% PEG 400 |