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8STQ

Crystal Structure of HIV-1 Reverse Transcriptase (Y181C) varient in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-2-naphthonitrile (JLJ600), a non-nucleoside inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]80
Detector technologyCCD
Collection date2013-10-18
DetectorADSC QUANTUM 315r
Wavelength(s)1.075
Spacegroup nameC 1 2 1
Unit cell lengths161.285, 73.845, 107.256
Unit cell angles90.00, 99.71, 90.00
Refinement procedure
Resolution35.242 - 2.955
R-factor0.2299
Rwork0.226
R-free0.27820
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.724
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.000
High resolution limit [Å]2.9508.0002.950
Rmerge0.1040.0680.467
Total number of observations92061
Number of reflections2559911251110
<I/σ(I)>10.7
Completeness [%]97.682.187.5
Redundancy3.63.23.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP727750 mM MES pH 7.0, 20% PEG 8000, 100 mM ammonium sulfate, 15 mM magnesium sulfate, and 5 mM spermine

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