8SQT
Crystal Structure of Bacterioferritin (Bfr) from Brucella abortus (iron bound, cubic form 2, F16L mutant)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 19-ID |
Synchrotron site | NSLS-II |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-14 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.9795 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 170.718, 170.718, 170.718 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.280 - 2.200 |
R-factor | 0.1972 |
Rwork | 0.194 |
R-free | 0.26220 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.070 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.21rc1_4933: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.280 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.142 | 2.706 |
Rmeas | 0.143 | 2.740 |
Rpim | 0.023 | 0.423 |
Total number of observations | 441158 | 39929 |
Number of reflections | 11356 | 962 |
<I/σ(I)> | 26.3 | 1.9 |
Completeness [%] | 100.0 | |
Redundancy | 38.8 | 41.5 |
CC(1/2) | 1.000 | 0.693 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 291 | Berkeley G7: 1.5M ammonium sulfate, 5% (v/v) MPD, 100 mM sodium acetate pH 4.5, BrabA.00028.a.A1.PW39164 at 10 mg/mL. Plate: 10390, well G7 drop 2. Puck: PSL-1812, Cryo: 2.5M lithium sulfate. 10 minute soak in 25 mM ferrous ammonium sulfate in cryo |