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8SPP

Crystal structure of a heme enzyme RufO in rufomycin biosynthesis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-02
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 41 21 2
Unit cell lengths77.686, 77.686, 137.143
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.870 - 1.890
R-factor0.1948
Rwork0.192
R-free0.23580
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3r9c
RMSD bond length0.006
RMSD bond angle0.836
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwarePHENIX ((1.19.2_4158: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.920
High resolution limit [Å]1.8905.1301.890
Rmerge0.1530.0810.938
Rmeas0.1570.0850.962
Rpim0.0360.0220.204
Total number of observations664064
Number of reflections3347818911552
<I/σ(I)>5.7
Completeness [%]96.797.591.9
Redundancy19.816.817.3
CC(1/2)0.9860.9960.947
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2770.2 M sodium tartrate dibasic dihydrate and 20% (w/v) polyethylene glycol 3,350

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