8SPM
Crystal structure of NikA in complex Ni-AMA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-02-05 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 1.18 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 66.420, 66.420, 267.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.150 - 2.150 |
R-factor | 0.1918 |
Rwork | 0.189 |
R-free | 0.24220 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.193 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.19.1_4122: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.150 | 2.227 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmerge | 0.094 | |
Rmeas | 0.098 | |
Number of reflections | 33650 | 3262 |
<I/σ(I)> | 18.15 | 0.77 |
Completeness [%] | 93.0 | 74.89 |
Redundancy | 14.1 | |
CC(1/2) | 0.999 | 0.252 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 294 | 0.17 M ammonium acetate, 0.1 M sodium citrate pH 5.8, 23% PEG 4000, and 17% glycerol |