8SP2
Crystal structure of metformin hydrolase (MfmAB) from Pseudomonas mendocina sp. MET-2 apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-28 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 |
Unit cell lengths | 103.530, 107.880, 114.510 |
Unit cell angles | 93.43, 97.63, 98.11 |
Refinement procedure
Resolution | 74.608 - 2.200 |
Rwork | 0.212 |
R-free | 0.25700 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.314 |
Data reduction software | XDS (VERSION Jan 10, 2022 BUILT=20220820) |
Data scaling software | XSCALE (VERSION Jan 10, 2022 BUILT=20220820) |
Phasing software | MOLREP (Version 11.0) |
Refinement software | REFMAC (5.8.0411) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 80.000 | 2.400 | 2.300 |
High resolution limit [Å] | 2.200 | 2.300 | 2.200 |
Number of reflections | 224389 | 24279 | 27288 |
<I/σ(I)> | 12.75 | 2.2 | 1.59 |
Completeness [%] | 91.2 | 93.9 | 89 |
Redundancy | 2.0558 | ||
CC(1/2) | 0.999 | 0.845 | 0.745 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 1 uL 10 mg/mL protein + 1 uL 13.5% w/v PEG3350, 0.1 M Bis-Tris propane, 0.2 M NaNO3, pH 7.5 |