8SKY
Crystal structure of YisK from Bacillus subtilis in complex with oxalate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 120 |
Detector technology | PIXEL |
Collection date | 2019-09-25 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 1.00003 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 52.336, 94.845, 123.938 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.210 - 2.400 |
R-factor | 0.1914 |
Rwork | 0.189 |
R-free | 0.23640 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.171 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.210 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.135 | 1.460 |
Rpim | 0.041 | 0.632 |
Number of reflections | 24631 | 2351 |
<I/σ(I)> | 14 | |
Completeness [%] | 99.0 | 92.7 |
Redundancy | 11.5 | |
CC(1/2) | 0.998 | 0.386 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289 | 0.1 M AmSO4, 25% (w/v) PEG-4000 and 15% (v/v) glycerol |