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8SHB

Crystal Structure of PRMT3 with Compound YD1-208

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2021-02-13
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97918
Spacegroup nameP 43 21 2
Unit cell lengths70.140, 70.140, 172.370
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.650 - 2.090
R-factor0.20652
Rwork0.205
R-free0.23776
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.439
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.120
High resolution limit [Å]2.0805.6402.080
Rmerge0.1300.0470.949
Rmeas0.1360.0500.983
Rpim0.0370.0150.248
Total number of observations360421
Number of reflections2502514121239
<I/σ(I)>6.1
Completeness [%]95.093.895.7
Redundancy14.411.214.3
CC(1/2)0.9920.9980.806
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29120% PEG3350, 0.3 M Sodium formate

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