Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8RVD

Unbound murine diabetogenic 4.1 TCR

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2023-11-25
DetectorDECTRIS PILATUS3 X 6M
Wavelength(s)0.979260
Spacegroup nameP 1 21 1
Unit cell lengths129.986, 151.131, 135.550
Unit cell angles90.00, 92.80, 90.00
Refinement procedure
Resolution135.390 - 3.000
R-factor0.21889
Rwork0.216
R-free0.26619
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.818
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]151.1303.200
High resolution limit [Å]3.0003.150
Rmerge0.1801.385
Rmeas0.2131.639
Rpim0.1140.870
Total number of observations15523
Number of reflections903514447
<I/σ(I)>6.21
Completeness [%]99.8
Redundancy3.53.5
CC(1/2)0.9930.446
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52950.1 M sodium phosphate (NaH2PO4) pH 6.5, 14% w/v PEG 8000

239492

PDB entries from 2025-07-30

PDB statisticsPDBj update infoContact PDBjnumon