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8RNZ

Metal-binding domain 3 of copper-transporting ATPase RAN1 from Arabidopsis thaliana

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-06-15
DetectorDECTRIS EIGER2 S 16M
Wavelength(s)0.8856
Spacegroup nameP 21 2 21
Unit cell lengths50.755, 51.481, 62.722
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution51.480 - 1.980
R-factor0.1942
Rwork0.192
R-free0.23490
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.625
Data reduction softwareDIALS (3.17.0)
Data scaling softwareDIALS (3.17.0)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.21_5190)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.4802.080
High resolution limit [Å]1.9801.980
Rmerge0.1200.558
Rmeas0.1310.604
Rpim0.0500.228
Number of reflections221081670
<I/σ(I)>5.810.74
Completeness [%]99.899.24
Redundancy6.77.1
CC(1/2)0.9960.836
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5285.15precipitant: 200 mM sodium chloride, 100 mM MES pH 6.5, 10% (w/v) PEG 4000 protein solution: 4.8 mg/mL protein, 300 mM sodium chloride, 50 mM HEPES pH 7.2

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PDB entries from 2025-07-02

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