8RMZ
Apoform of spermine/spermidine acetyl transferase (AtSSAT) from A. thaliana
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.99187 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 101.240, 101.240, 48.905 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.800 - 1.739 |
R-factor | 0.2085 |
Rwork | 0.208 |
R-free | 0.22560 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.020 |
Data reduction software | autoPROC |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.4) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 71.587 | 71.587 | 1.840 |
High resolution limit [Å] | 1.739 | 5.263 | 1.739 |
Rmerge | 0.107 | 0.056 | 3.123 |
Rmeas | 0.109 | 0.057 | 3.194 |
Rpim | 0.021 | 0.012 | 0.667 |
Total number of observations | 570015 | 26032 | 24736 |
Number of reflections | 21764 | 1088 | 1088 |
<I/σ(I)> | 14.12 | 34.31 | 1.36 |
Completeness [%] | 94.8 | 100 | 64.8 |
Completeness (spherical) [%] | 81.6 | 100.0 | 26.7 |
Completeness (ellipsoidal) [%] | 94.8 | 100.0 | 64.8 |
Redundancy | 26.19 | 23.93 | 22.74 |
CC(1/2) | 0.999 | 0.999 | 0.578 |
Anomalous completeness (spherical) | 80.9 | 100.0 | 26.4 |
Anomalous completeness | 94.8 | 100.0 | 66.5 |
Anomalous redundancy | 14.1 | 14.5 | 12.0 |
CC(ano) | -0.402 | -0.479 | -0.017 |
|DANO|/σ(DANO) | 0.6 | 0.4 | 0.6 |
Diffraction limits | Principal axes of ellipsoid fitted to diffraction cut-off surface |
1.730 Å | 1.000, 1.000, 1.000 |
1.730 Å | 0.000, 0.000, 0.000 |
2.050 Å | 0.000, 0.000, 0.000 |
Criteria used in determination of diffraction limits | local <I/sigmaI> ≥ 1.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 292 | PEG 4000, Ammonium Sulfate, Na citrate |