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8RFU

Low pH (5.5) nitrite-bound MSOX movie series dataset 40 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [24.4 MGy] - water ligand + decarboxylated AspCAT (final)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-18
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.855
Spacegroup nameP 63
Unit cell lengths104.520, 104.520, 64.690
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution30.000 - 2.180
R-factor0.18757
Rwork0.186
R-free0.22210
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.753
Data reduction softwarexia2
Data scaling softwareAimless
Refinement softwareREFMAC (5.8.0419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.2602.250
High resolution limit [Å]2.1802.180
Rpim0.0850.844
Number of reflections211331822
<I/σ(I)>6.31.2
Completeness [%]99.9100
Redundancy5.55.6
CC(1/2)0.9930.320
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.32930.1 M Tris pH 7.3, 1.8 M Ammonium Sulphate

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PDB entries from 2024-10-09

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