8REL
Fab of an anti-PvAMA1 monoclonal antibody
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-12-04 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9340 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.490, 61.520, 116.990 |
Unit cell angles | 90.00, 97.49, 90.00 |
Refinement procedure
Resolution | 42.240 - 2.100 |
R-factor | 0.20206 |
Rwork | 0.200 |
R-free | 0.25461 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.065 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0415) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.020 | 2.210 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.139 | 0.608 |
Rmeas | 0.162 | 0.713 |
Rpim | 0.083 | 0.369 |
Number of reflections | 41875 | 4784 |
<I/σ(I)> | 7.7 | 2.1 |
Completeness [%] | 94.8 | 74.7 |
Redundancy | 3.8 | 3.6 |
CC(1/2) | 0.991 | 0.503 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 290 | Crystals of Fab8.1.1 were obtained by mixing 1 micro-L of protein and 1 micro-L of reservoir containing 24% PEG 4000, 80 mM sodium acetate pH 4.6 and 0.16 M ammonium acetate. The final protein concentration was 3.6 mg/ml. Cryo-protecting buffer for FabF8.1.1 consisted of the crystallisation buffer where PEG was increased to 30% added with 15% of glycerol (v/v). |