8RE3
Crystal Structure determination of Dye-decolorizing Peroxidase (DyP) mutant M190G from Deinoccoccus radiodurans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-07 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 82.090, 97.697, 116.037 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 74.740 - 1.510 |
R-factor | 0.1682 |
Rwork | 0.167 |
R-free | 0.19480 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.050 |
Data reduction software | autoPROC |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 74.740 | 1.655 |
High resolution limit [Å] | 1.510 | 1.511 |
Rmerge | 0.071 | 0.849 |
Rmeas | 0.078 | 0.946 |
Rpim | 0.032 | 0.408 |
Number of reflections | 188084 | 4914 |
<I/σ(I)> | 11.3 | 1.7 |
Completeness [%] | 93.4 | |
Redundancy | 5.7 | |
CC(1/2) | 0.997 | 0.784 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293.15 | 0.06M Divalent (0.3M Magnesium Cloride hexahydrate, 0.3M Calcium Cloride dihydrate), 0.1M buffer (1M Tris pH8.5, BICINE), 50% v/v Precipitant (40% v/v PEG 500 MME, 20% w/v PEG 20000) |