8RCI
Human p53 DNA-binding domain bound to DARPin C10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-04 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 37.692, 93.897, 53.168 |
Unit cell angles | 90.00, 110.17, 90.00 |
Refinement procedure
Resolution | 46.900 - 1.500 |
R-factor | 0.153439775813 |
Rwork | 0.151 |
R-free | 0.19676 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.766 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.950 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.062 | 0.837 |
Rpim | 0.029 | 0.387 |
Number of reflections | 54680 | 2696 |
<I/σ(I)> | 13.8 | 2 |
Completeness [%] | 98.6 | |
Redundancy | 5.7 | |
CC(1/2) | 0.998 | 0.674 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Protein solution: 2.5 mg/ml of p53 DBD-DARPin C10 complex (1:1 ratio) in 50 mM Tris, pH 8, 150 mM NaCl, 0.5 mM TCEP Crystallization buffer: 25 % w/v PEG 3350 |